infercnv - Infer Copy Number Variation from Single-Cell RNA-Seq Data

Using single-cell RNA-Seq expression to visualize CNV in cells.

Last updated 29 days ago

softwarecopynumbervariationvariantdetectionstructuralvariationgenomicvariationgeneticstranscriptomicsstatisticalmethodbayesianhiddenmarkovmodelsinglecelljagscpp

11.01 score 575 stars 652 scripts 2.4k downloads

gsalib - Utility Functions for 'GATK'

Provides utility functions used by the Genome Analysis Toolkit ('GATK') to load tables and plot data. The 'GATK' is a toolkit for variant discovery in high-throughput sequencing data.

Last updated 1 years ago

3.88 score 6 stars 25 scripts 387 downloads